Canine Medicine and Genetics

Table 1 Regions identified in the primary analysis for differential selective sweep including 12 Australian Kelpie and 12 Australian Working Kelpie dogs that were then assessed for validation in a further 10 AK and 28 AWK individuals

From: Strong selection for behavioural resilience in Australian stock working dogs identified by selective sweep analysis

				Primary			Validation
	Chromosome	Position (1 Mb bin) canfam 3.0	Markers in window	maf ^£ AWK ^†	maf AK ^‡	maf absolute difference	maf AWK ^†	maf AK ^‡	maf absolute difference
AWK	3	26000000	64	0.012	0.176	0.164	0.027*	0.187	0.16
	3	27000000	79	0.012	0.194	0.181	0.031*	0.187	0.156
	3	29000000	70	0.009	0.178	0.169	0.015*	0.151	0.135
	3	30000000	66	0.008	0.161	0.153	0.082	0.178	0.096
	10	47000000	72	0.048	0.169	0.121	0.101	0.173	0.071
	11	2000000	40	0.016	0.184	0.169	0.022	0	0.022
	11	17000000	83	0.05	0.179	0.13	0.148	0.182	0.034
	11	36000000	71	0.041	0.186	0.144	0.062	0.118	0.056
	15	46000000	72	0.031	0.195	0.164	0.106	0.21	0.104
	24	46000000	88	0.025	0.16	0.136	0.052	0.153	0.1
	30	1000000	82	0.011	0.13	0.119	0.014	0.085	0.071
	30	5000000	41	0.046	0.162	0.116	0.092	0.022	0.069
	39	102000000	47	0.026	0.153	0.127	0.213	0.23	0.017
AK	8	64000000	81	0.166	0.049	0.118	0.189	0.049*	0.141
	8	65000000	75	0.165	0.042	0.123	0.221	0.040*	0.182
	8	67000000	71	0.13	0.008	0.122	0.131	0.004*	0.126
	30	23000000	87	0.193	0.029	0.164	0.178	0.016*	0.162
	39	16000000	42	0.208	0.048	0.161	0.057	0.075	0.018

^†Australian Working Kelpie.
^‡Australian Kelpie.
^£minor allele frequency (maf).
*supported in expanded analysis.

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ISSN: 2662-9380

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