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Table 4 Regions implicated by GISTIC analysis represent regions relevant to neoplasia

From: A cultured approach to canine urothelial carcinoma: molecular characterization of five cell lines

Genomic region

Aberration

Q-Bound

G-Score

chr10:13,614,516-14,400,849

CN Gain

8.22E-06

9.606238

chr10:17,743,915-20,676,296

CN Loss

0.02737

7.847499

chr10:44,389,882-71,751,790

CN Gain

0.005379

5.952698

chr10:5,318,483-7,102,150

CN Gain

0.005379

5.990278

chr13:3,033,844-66,047,830

CN Gain

0.005379

5.576475

chr36:22,492,857-25,421,734

CN Gain

0.005379

5.578811

chr38:3,874,100-4,368,891

CN Gain

0.005379

5.403421

  1. Minimum regions of shared aberration among cell lines are shown, as well as the called aberration (CN copy number), Q-bound, and G-score. The G-score reflects the frequency as well as magnitude of the aberration in the cohort, while the Q-bound indicates significance. The most notable regions were located on CFA10, CFA13 and 36; gains of CFA13 and 36 are of diagnostic relevance in primary UC and were similarly aberrant in cell lines