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Table 2 Characterization of regions not covered after merging all four libraries

From: Evaluation of whole-genome sequencing of four Chinese crested dogs for variant detection using the ion proton system

Features Genome-wide Exome-wide
Bases not covered 24 811 567 1 384 635
N bases in reference sequence (gaps) 10 040 013 42 019
Total not covered bases excluding gaps 14 771 554 (0.63 % of genome) 1 342 616 (2.57 % of exome)
Bases not covered in repeat regions 4 912 354 983 511
Bases not covered in CpG Islands 4 375 887 253 643