Table 2 Characterization of regions not covered after merging all four libraries
Features | Genome-wide | Exome-wide |
|---|---|---|
Bases not covered | 24 811 567 | 1 384 635 |
N bases in reference sequence (gaps) | 10 040 013 | 42 019 |
Total not covered bases excluding gaps | 14 771 554 (0.63 % of genome) | 1 342 616 (2.57 % of exome) |
Bases not covered in repeat regions | 4 912 354 | 983 511 |
Bases not covered in CpG Islands | 4 375 887 | 253 643 |