Chromosome | Start (bp) | End (bp) | Length of consensus ROH in beadchip SNPs | Length of consensus ROH in bp | Genes that are located in the consensus ROH | Associated diseases of those genes |
---|---|---|---|---|---|---|
1 | 23,754,226 | 24,443,343 | 55 | 689.117 | MEX3C, SMAD4, ELAC1, ME2, MRO, RF00001, MC2R, MC5R, ENSCAFG00000032822 | Glaucoma (SMAD4), Idiopathic epilepsy (ME2) |
3 | 67,712,997 | 67,855,181 | 13 | 142.184 | ENSCAFG00000033564, ENSCAFG00000036945, ENSCAFG00000037957 | – |
3 | 67,876,487 | 68,200,003 | 29 | 323.516 | ENSCAFG00000033306, ENSCAFG00000033607 | – |
3 | 69,068,007 | 69,485,604 | 38 | 417.597 | CLNK, ZNF518B, SLC2A9, WDR1, ENSCAFG00000039826, ENSCAFG00000033935 | Diabetes mellitus, entropion, hyperuricosuria (SLC2A9) |
4 | 38,457,632 | 38,587,643 | 15 | 130.011 | NSG2, ENSCAFG00000032093 | – |
13 | 3,182,619 | 3,330,775 | 13 | 148.156 | GRHL2, ENSCAFG00000030800 | Deafness (GRHL2) |
13 | 3,490,088 | 3,550,490 | 7 | 60.402 | ENSCAFG00000036103 | – |
17 | 35,638,035 | 35,834,516 | 17 | 196.481 | BCL2L11, ENSCAFG00000036821, ENSCAFG00000007091 | Deafness (BCL2L11) |
17 | 35,861,411 | 35,861,411 | 1 | 1 | ENSCAFG00000035515, ENSCAFG00000040340 | – |
17 | 39,631,741 | 39,800,897 | 18 | 169.156 | CAPG, ELMOD3, RETSAT, TCF7L1, ENSCAFG00000024531 | Deafness (ELMOD3) |
24 | 15,945,228 | 16,028,176 | 7 | 82.948 | SHLD1 | – |
24 | 34,585,142 | 34,731,796 | 12 | 146.654 | NCOA3, ENSCAFG00000035729, ENSCAFG00000010850 | – |
38 | 11,140,991 | 11,561,386 | 36 | 420.395 | USH2A | Deafness |