Searching for

Table 2 Allelic associations

					Minor/associated allele	Frequency		Major allele	p-values			Odds ratio
	Gene	CFA	Position (bp)	Annotation		Case	Control		Raw	Bonferroni	Permutation		95% CI
Bichon Frise
rs23901704	ZFP57	35	26,267,827	Syn. coding	T	0.00	0.24	C	2.58E-04	7.21E-03	4.30E-03	nc	nc
Cocker Spaniel
rs24305581	MTTL1	5	82,755,249	Intronic	A	0.44	0.23	G	3.73E-04	1.05E-02	1.13E-02	2.67	1.54-4.61
rs22302353	PAX4	14	8,718,207	Intronic	A	0.09	0.33	G	6.45E-06	1.81E-04	3.00E-04	0.21	0.10-0.43
rs22686871	INS	18	46,324,586	Syn. coding	G	0.00	0.13	T	7.22E-05	2.02E-03	1.90E-03	nc	nc
Miniature Dachshund
rs8804236	HNF4A	24	31,897,491	Syn. coding	G	0.14	0.36	A	1.45E-03	4.62E-02	4.31E-02	0.28	0.12-0.63
Samoyed
rs23892119	ZFP57	35	26,270,002	Intronic	C	0.11	0.00	T	1.55E-04	5.10E-03	5.50E-03	nc	nc

CFA = canine chromosome number: Permutations: n=10,000: CI = confidence interval: Syn. Coding = synonymous coding SNP; nc = not calculable as one of the populations does not carry one of the alleles. Allele associations are calculated using the minor allele as a reference.

ISSN: 2662-9380