Table 1 Odds Ratios (OR) and 95% confidence intervals (CI) for the CFA14 SNPs associated with idiopathic epilepsy that reached genome wide significance. The CanFam3.1 reference allele is indicated in bold, and the allele associated with elevated risk for the Belgian shepherd is indicated with an asterisk
From: Genome-wide association analysis of idiopathic epilepsy in the Belgian shepherd
SNP name | Location (bp) | Allele | Controls (2n = 124) | Cases (2n = 70) | OR (95% CI) | p value |
|---|---|---|---|---|---|---|
BICF2P1043850 | 36,043,569 | A | 108 | 41 | 0.21 (0.10–0.43) | 0.000010 |
G* | 16 | 29 | ||||
BICF2S23749130 | 36,098,932 | A | 109 | 41 | 0.19 (0.09–0.40) | 0.000005 |
G* | 15 | 29 | ||||
TIGRP2P191770_rs9025240 | 36,123,553 | A | 109 | 41 | 0.19 (0.09–0.40) | 0.000005 |
C* | 15 | 29 |