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Table 6 DLA haplotypes identified in cases and controls for the three highest-risk breeds included in the study

From: Dog leucocyte antigen (DLA) class II haplotypes and risk of canine diabetes mellitus in specific dog breeds

Haplotype ID

Haplotype

Samoyed

Tibetan Terrier

Cairn Terrier

Comment

DRB1

DQA1

DQB1

Cases % 2n = 68

Controls % 2n = 140

Cases % 2n = 40

Controls % 2n = 80

Cases % 2n = 60

Controls % 2n = 60

1

001:01

001:01

002:01

  

2.5

5.0

5

10

Risk haplotype in Labrador Retriever

2

001:01

001:01

036:01

  

17.5

11.3

   

4

002:01

009:01

001:01

    

0

3

 

9

009:01

001:01

008:01:1

  

2.5

5.0

10

13

 

10

009:01

001:01

008:02

23.5

17.1

     

12

011:01

002:01

013:03

    

0

2

 

14

012:01

004:01

017:01–013:03

    

0

2

Protective haplotype in combined analysis and in Cocker Spaniel

16

015:01

006:01

003:01

0

3.6

  

0

8

Protective haplotype in combined analysis

17

015:01

006:01

011:01

1.5

0

  

3

0

 

18

015:01

006:01

019:01–054:02

63.2

65

    

Unique to Samoyed

19

015:01

006:01

020:02

    

0

3

 

21

015:01

006:01

023:01

  

15.0

11.3

43

35

 

22

015:01

006:01

026:01

  

7.5

18.8

  

Unique to Tibetan Terrier

24

015:02

006:01

003:01

  

0.0

1.3

   

25

015:02

006:01

023:01

0

0.7

17.5

15.0

35

22

 

26

018:01

001:01

002:01

    

2

0

 

27

018:01

001:01

008:02

    

0

2

 

28

020:01

004:01

013:03

7.4

10

    

Risk haplotype in CKCS

30

079:01

001:01

002:01

  

30.0

26.3

  

Unique to Tibetan Terrier

 

001:01

002:01

036:01

  

2.5

0

   
 

015:02

006:01

054:01

  

2.5

0

  

Unique to Tibetan Terrier cases

 

015:03

006:01

013:05

  

0

1.3

  

Unique to Tibetan Terrier controls

 

015:03

006:01

023:01

  

0

1.3

  

Unique to Tibetan Terrier controls

 

017:01

002:01

013:03

    

2

0

 
 

040:01

010:01

019:01

4.4

3.6

    

Unique to Samoyed

 

112:01

001:01

008:01:2

  

2.5

3.8

  

Unique to Tibetan Terrier